STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40213.1PPOX class F420-dependent enzyme. (137 aa)    
Predicted Functional Partners:
EFL41679.1
Heme oxygenase.
  
  
  0.907
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
       0.780
EFL40211.1
Conserved hypothetical protein.
       0.704
EFL40261.1
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.672
EFL41738.1
Conserved hypothetical protein.
   
    0.604
arcA
Arginine deiminase.
   
    0.551
EFL43263.1
Zinc finger CDGSH type superfamily protein.
   
    0.551
EFL38096.1
NAD-dependent epimerase/dehydratase.
   
    0.547
EFL39740.1
NAD dependent epimerase/dehydratase.
   
    0.547
EFL42921.1
Conserved hypothetical protein.
   
    0.526
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.