STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40214.1Conserved hypothetical protein. (111 aa)    
Predicted Functional Partners:
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.910
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.910
EFL43010.1
Bifunctional P-450/NADPH-P450 reductase; Truncated CDS; unextendable partial coding region; Belongs to the cytochrome P450 family.
    
 0.828
EFL41895.1
Glutamate synthase large subunit.
     
  0.797
EFL38465.1
anthraniloyl-CoA monooxygenase.
  
 
 0.791
EFL37755.1
2,4-dienoyl-CoA reductase.
    
  0.766
EFL41408.1
Oxidoreductase.
    
 0.730
EFL37975.1
Formate dehydrogenase, beta subunit.
     
 0.726
EFL40215.1
Regulatory protein.
       0.715
EFL38555.1
Oxidoreductase.
     
 0.708
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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