STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40215.1Regulatory protein. (333 aa)    
Predicted Functional Partners:
EFL40216.1
Regulatory protein.
 
    
0.789
EFL41665.1
Conserved hypothetical protein.
  
 
  0.770
EFL40214.1
Conserved hypothetical protein.
       0.715
EFL41666.1
LuxR family transcriptional regulator.
  
 
  0.711
EFL38191.1
PE-PGRS family protein.
   
 0.604
EFL37710.1
Integral membrane protein.
  
     0.594
EFL40958.1
Integral membrane protein.
  
     0.567
EFL41297.1
Integral membrane protein.
  
     0.548
EFL42351.1
RNA polymerase ECF-subfamily sigma factor.
  
     0.492
EFL41523.1
Membrane protein.
  
     0.490
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.