STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40216.1Regulatory protein. (328 aa)    
Predicted Functional Partners:
EFL37385.1
Conserved hypothetical protein.
 
 0.860
EFL37877.1
Regulatory protein.
 
 0.855
EFL42694.1
Conserved hypothetical protein.
 
 0.848
EFL38934.1
LuxR-family transcriptional regulator.
 
 0.846
EFL38117.1
Transcriptional regulatory protein.
  
 0.826
EFL38190.1
Regulatory protein.
  
 0.826
EFL42693.1
Large transcriptional regulator.
  
 0.826
EFL42858.1
Regulatory protein.
  
 0.826
EFL41665.1
Conserved hypothetical protein.
  
  0.794
EFL40215.1
Regulatory protein.
 
    
0.791
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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