STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40218.1Solute binding protein. (373 aa)    
Predicted Functional Partners:
EFL38405.1
Sugar ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.948
EFL41517.1
Sugar ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.930
EFL38406.1
Sugar ABC transporter, ATP-binding protein.
 
 0.927
EFL41518.1
Sugar ABC transporter, ATP-binding protein.
 
 0.792
EFL43408.1
Sugar ABC-type transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.771
EFL43003.1
ABC sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.748
EFL43002.1
ABC sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.737
EFL37967.1
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.720
EFL43195.1
ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.696
EFL43196.1
Ribose transport system permease RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.670
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.