STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40224.1Ferredoxin, 4Fe-4S. (760 aa)    
Predicted Functional Partners:
EFL41895.1
Glutamate synthase large subunit.
    
 0.868
EFL39025.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.773
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.762
EFL42996.1
Iron-sulfur cluster-binding protein.
  
 
 0.740
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.732
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.732
EFL38040.1
methylmalonyl-CoA mutase.
    
 0.721
EFL40223.1
Glycosyltransferase.
       0.718
EFL43231.1
ferredoxin-NADP reductase.
    
 0.709
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
 0.704
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.