STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40225.1Fusidic acid esterase. (507 aa)    
Predicted Functional Partners:
EFL40226.1
Mucin-2.
 
  
 
0.807
EFL40227.1
Integral membrane protein.
       0.724
EFL40737.1
Conserved hypothetical protein.
  
     0.675
EFL40650.1
Conserved hypothetical protein.
  
     0.650
EFL40224.1
Ferredoxin, 4Fe-4S.
       0.582
EFL39459.1
Conserved hypothetical protein.
    
   0.571
EFL39464.1
dTMP kinase.
    
   0.571
EFL42915.1
alpha-L-arabinofuranosidase (Arabinosidase).
   
   0.558
EFL42917.1
Endo-1,4-beta-xylanase Z.
   
   0.558
EFL40139.1
Conserved hypothetical protein.
  
     0.528
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.