STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40234.1Conserved hypothetical protein. (218 aa)    
Predicted Functional Partners:
EFL37204.1
Membrane protein.
 
     0.793
EFL40235.1
Membrane protein.
 
     0.793
EFL40233.1
Hypothetical protein.
       0.773
EFL40183.1
Conserved hypothetical protein.
  
     0.553
EFL41086.1
Membrane protein.
  
     0.477
EFL40831.1
Conserved hypothetical protein.
  
     0.472
EFL41979.1
Conserved hypothetical protein.
  
     0.417
EFL42194.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.406
EFL43505.1
formamidopyrimidine-DNA glycosylase.
  
     0.401
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.