STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40242.1Two-component system response regulator TcsR2. (202 aa)    
Predicted Functional Partners:
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.983
EFL40241.1
Two-component sensor histidine kinase.
 
 0.975
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.974
EFL38527.1
Two-component sensor histidine kinase; Truncated CDS.
 
 0.952
EFL41601.1
Two-component system sensor kinase.
 
 0.951
EFL40540.1
Two-component system sensor kinase.
 
 0.949
EFL42120.1
Two-component system sensor kinase.
 
  0.866
EFL39713.1
Two-component system sensor kinase; Truncated CDS.
  
  0.845
EFL40195.1
Two-component system sensor kinase.
  
  0.841
EFL41757.1
Two-component system sensor kinase.
  
  0.839
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.