STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40245.1Conserved hypothetical protein. (421 aa)    
Predicted Functional Partners:
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 
 0.799
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.765
EFL43276.1
phenylacetate-CoA oxygenase, PaaH subunit.
 
 
 0.725
EFL43275.1
phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.607
EFL40328.1
phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.605
EFL43277.1
phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.597
EFL40329.1
phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.595
EFL43278.1
phenylacetate-CoA oxygenase, PaaJ subunit.
 
  
 0.587
EFL40330.1
phenylacetate-CoA oxygenase, PaaJ subunit.
 
  
 0.583
EFL39308.1
Amidase; Belongs to the amidase family.
    
 0.579
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.