STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40245.1Conserved hypothetical protein. (421 aa)    
Predicted Functional Partners:
EFL43276.1
phenylacetate-CoA oxygenase, PaaH subunit.
 
 
 0.771
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 
 0.770
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.730
EFL42578.1
Conserved hypothetical protein.
  
 
 0.660
EFL38549.1
Glucosyltransferase.
    
  0.656
EFL41298.1
Transferase.
    
  0.656
EFL43275.1
phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.648
EFL40328.1
phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.646
EFL43278.1
phenylacetate-CoA oxygenase, PaaJ subunit.
 
  
 0.643
EFL40330.1
phenylacetate-CoA oxygenase, PaaJ subunit.
 
  
 0.640
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.