STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40249.1Conserved hypothetical protein. (415 aa)    
Predicted Functional Partners:
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.951
EFL40561.1
Riboflavin/cytosine deaminase.
   
   0.945
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
  
 
 0.935
EFL37540.1
Condensation domain-containing protein.
  
 
 0.935
EFL43484.1
Polyketide synthase.
  
 
 0.918
EFL41895.1
Glutamate synthase large subunit.
   
 
 0.913
EFL39497.1
BirA bifunctional protein.
  
 0.885
EFL40250.1
Glycosyl transferase, family 2; Unextendable partial coding region.
     0.835
EFL43485.1
Polyketide synthase.
  
 
 0.820
EFL43487.1
Polyketide synthase.
  
 
 0.820
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.