STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40250.1Glycosyl transferase, family 2; Unextendable partial coding region. (226 aa)    
Predicted Functional Partners:
EFL40249.1
Conserved hypothetical protein.
     0.835
EFL40246.1
NAD-dependent epimerase/dehydratase.
 
 
  0.655
EFL40251.1
Conserved hypothetical protein.
       0.644
EFL37282.1
NAD dependent epimerase/dehydratase.
 
 
  0.639
EFL40252.1
NAD-dependent epimerase/dehydratase.
 
 
  0.629
EFL38231.1
HAD-superfamily hydrolase subfamily IIIA; Truncated CDS.
  
 0.626
EFL41383.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.605
EFL38549.1
Glucosyltransferase.
 
  
 0.595
EFL41298.1
Transferase.
 
  
 0.583
EFL42524.1
Phosphoglucomutase/phosphomannomutase.
  
 0.567
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.