Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40260.1Conserved hypothetical protein. (194 aa)    
Predicted Functional Partners:
EFL41560.1
Bacterial stress protein.
 
    0.826
EFL42776.1
Conserved hypothetical protein.
 
    0.825
EFL41559.1
Conserved hypothetical protein.
 
    0.821
EFL41562.1
Conserved hypothetical protein.
 
     0.780
EFL40426.1
Bacterial stress protein.
  
     0.774
EFL42020.1
Stress protein.
  
     0.774
EFL41561.1
ATP/GTP-binding protein.
 
     0.771
EFL41899.1
Toxic cation resistance protein; Unextendable partial coding region.
  
     0.770
EFL41563.1
Conserved hypothetical protein.
 
     0.766
EFL37888.1
Conserved hypothetical protein.
  
     0.687
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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