STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40264.1Hydrolase. (257 aa)    
Predicted Functional Partners:
EFL39646.1
Polysaccharide deacetylase.
  
     0.654
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.554
EFL40263.1
Nef-associated protein 1 (Thioesterase NAP1).
       0.511
EFL39645.1
Secreted protein.
  
     0.479
EFL41087.1
Glycosyl transferase, group 2.
 
 
0.472
EFL39825.1
Glycosyl transferase, group 2.
 
 
0.462
EFL39824.1
Integral membrane transferase.
 
 
 0.423
EFL41088.1
Integral membrane protein.
 
 
 0.423
EFL42777.1
Hopene-associated glycosyltransferase HpnB.
  
 
  0.420
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.