STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40280.1Membrane protein. (297 aa)    
Predicted Functional Partners:
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 
 0.813
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 
 0.781
EFL37443.1
PAS/PAC sensor hybrid histidine kinase.
 
 0.776
EFL37442.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.744
EFL42624.1
Conserved hypothetical protein.
  
     0.671
EFL38467.1
Conserved hypothetical protein.
  
   0.670
EFL42695.1
Hypothetical protein.
  
 
 0.660
EFL41530.1
Conserved hypothetical protein.
  
     0.641
EFL40045.1
Conserved hypothetical protein.
  
   0.623
EFL40403.1
Membrane protein.
  
     0.607
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.