STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40287.1Conserved hypothetical protein. (288 aa)    
Predicted Functional Partners:
ureC
Urease, alpha subunit.
    
   0.787
EFL41403.1
Membrane protein.
  
     0.706
EFL40333.1
Conserved hypothetical protein.
  
    0.681
EFL39969.1
Alanine-rich protein.
  
     0.665
EFL42502.1
Membrane protein.
  
     0.634
EFL40851.1
Secreted protein.
  
     0.622
EFL39481.1
Membrane protein.
 
     0.620
EFL40879.1
Membrane protein.
  
     0.619
EFL39506.1
Integral membrane protein.
  
     0.611
EFL42295.1
Conserved hypothetical protein.
  
     0.605
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.