STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40288.1Conserved hypothetical protein. (206 aa)    
Predicted Functional Partners:
EFL43163.1
Conserved hypothetical protein.
  
     0.613
EFL40834.1
Conserved hypothetical protein.
  
     0.609
EFL43475.1
Conserved hypothetical protein.
  
     0.605
vapC-4
PIN family toxin-antitoxin system, toxin component; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.592
EFL39327.1
Membrane protein.
  
     0.563
EFL41291.1
Conserved hypothetical protein.
  
     0.562
EFL37453.1
Conserved hypothetical protein.
  
     0.520
EFL42827.1
Conserved hypothetical protein.
  
     0.517
EFL37575.1
Conserved hypothetical protein.
  
     0.484
EFL37499.1
Conserved hypothetical protein.
  
     0.475
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.