Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40290.1Conserved hypothetical protein. (296 aa)    
Predicted Functional Partners:
vapC-4
PIN family toxin-antitoxin system, toxin component; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.593
EFL40289.1
Conserved hypothetical protein.
       0.580
EFL43163.1
Conserved hypothetical protein.
  
     0.568
EFL40834.1
Conserved hypothetical protein.
  
     0.566
EFL43475.1
Conserved hypothetical protein.
  
     0.560
EFL41291.1
Conserved hypothetical protein.
  
     0.548
EFL37453.1
Conserved hypothetical protein.
  
     0.540
EFL39327.1
Membrane protein.
  
     0.529
EFL37575.1
Conserved hypothetical protein.
  
     0.479
EFL42827.1
Conserved hypothetical protein.
  
     0.470
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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