STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40301.1Carbon-nitrogen family hydrolase. (263 aa)    
Predicted Functional Partners:
EFL41895.1
Glutamate synthase large subunit.
 
  
 0.905
EFL39989.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
  
 
 0.812
EFL40302.1
Conserved hypothetical protein.
       0.762
EFL39712.1
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.741
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.728
EFL43231.1
ferredoxin-NADP reductase.
  
 0.719
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 0.706
EFL37411.1
Glutamate dehydrogenase, NAD-specific; Truncated CDS; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.703
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
   
 0.692
EFL37540.1
Condensation domain-containing protein.
   
 0.692
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.