STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40343.1Conserved hypothetical protein. (92 aa)    
Predicted Functional Partners:
EFL40342.1
Vegetative cell wall protein gp.
 
   
 0.877
EFL40347.1
Membrane protein.
 
   
 0.660
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.630
EFL43507.1
Membrane protein.
 
   
 0.626
EFL37930.1
Secreted protein.
  
  
 0.607
EFL40344.1
ABC transporter, ATP-binding protein.
 
     0.602
EFL39262.1
Thiazole biosynthesis adenylyltransferase ThiF.
     
 0.577
EFL37338.1
Mycothiol-dependent formaldehyde dehydrogenase.
  
  
 0.557
EFL42205.1
Alcohol dehydrogenase (zinc-binding).
  
  
 0.557
EFL43062.1
Mycothiol-dependent formaldehyde dehydrogenase.
  
  
 0.557
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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