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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40364.1DNA-binding protein. (182 aa)    
Predicted Functional Partners:
EFL40365.1
Serine/threonine protein kinase; Unextendable partial coding region.
 
 
   0.803
EFL40366.1
Membrane protein.
  
     0.704
EFL41966.1
Conserved hypothetical protein.
  
     0.685
EFL41869.1
Conserved hypothetical protein.
  
     0.669
EFL39424.1
Conserved hypothetical protein.
  
     0.655
EFL40282.1
Extracellular small neutral protease; Belongs to the peptidase M7 family.
  
     0.618
EFL41347.1
Conserved hypothetical protein.
  
     0.610
EFL41204.1
M6 family metalloprotease domain-containing protein.
  
     0.608
EFL40210.1
Conserved hypothetical protein.
  
     0.596
EFL38239.1
Iron-sulfur protein.
  
     0.571
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.