Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40386.1GNAT family acetyltransferase. (205 aa)    
Predicted Functional Partners:
EFL39503.1
Conserved hypothetical protein.
  
     0.749
EFL40384.1
Soj family protein.
       0.714
EFL40385.1
ParB family protein; Belongs to the ParB family.
       0.714
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.648
EFL40382.1
R3H domain-containing protein.
       0.625
EFL40380.1
Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.623
EFL40381.1
Membrane protein OxaA.
       0.623
rpmH
50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
       0.620
EFL40642.1
PbsX family transcriptional regulator.
  
     0.548
EFL41788.1
Metallophosphoesterase.
  
     0.543
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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