STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40400.1Integral membrane protein. (503 aa)    
Predicted Functional Partners:
EFL40054.1
Septum site determining protein.
  
     0.657
EFL40398.1
Transcriptional regulator, PadR family protein.
       0.644
EFL40397.1
Inositol 1-phosphate synthase.
       0.633
EFL40396.1
Membrane protein.
       0.622
EFL40399.1
Penicillin-binding protein.
  
    0.594
EFL39077.1
Secreted/membrane protein.
  
     0.588
EFL40618.1
Conserved hypothetical protein.
  
     0.575
EFL41879.1
Conserved hypothetical protein.
  
     0.575
EFL38945.1
Methionine synthase, vitamin-B12 independent.
  
     0.572
EFL40009.1
Conserved hypothetical protein.
  
     0.561
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.