STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40411.1MarR family transcriptional regulator. (154 aa)    
Predicted Functional Partners:
EFL40410.1
Acetyltransferase, GNAT family protein.
  
    0.861
EFL40413.1
Conserved hypothetical protein.
       0.706
EFL40412.1
Transmembrane efflux protein (MFS).
 
     0.648
EFL40414.1
GNAT family acetyltransferase.
       0.545
EFL37481.1
PTS system, IIBC component.
     
 0.506
EFL42978.1
TetR family transcriptional regulator.
  
     0.419
EFL41328.1
Glycosyl hydrolase, family 4.
  
  
  0.412
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.