STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40413.1Conserved hypothetical protein. (140 aa)    
Predicted Functional Partners:
EFL42075.1
cob(I)yrinic acid a,c-diamide adenosyltransferase.
    
 0.912
EFL42079.1
Cobalamin biosynthesis protein D.
    
 0.877
EFL41752.1
Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase.
    
 0.871
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
    
 0.868
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 
 0.858
EFL40411.1
MarR family transcriptional regulator.
       0.722
EFL42071.1
Precorrin-4 C11-methyltransferase.
 
  
 0.694
EFL38155.1
Malate synthase A; Belongs to the malate synthase family.
  
  
 0.637
EFL37581.1
Adenosylcobinamide amidohydrolase.
  
 
  0.608
EFL40412.1
Transmembrane efflux protein (MFS).
       0.585
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.