EFL40417.1 protein (Streptomyces griseoflavus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EFL40417.1

Cys/Met metabolism PLP-dependent enzyme. (390 aa)

Predicted Functional Partners:

EFL40981.1

0.996

EFL42248.1

0.967

EFL42770.1

0.954

EFL38273.1

0.918

EFL41143.1

0.912

EFL39098.1

0.911

EFL37670.1

0.905

EFL39476.1

0.897

EFL38543.1

0.893

EFL42595.1

0.890

Your Current Organism:

Streptomyces griseoflavus

NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL37670.1	EFL38273.1	SSRG_00474	SSRG_01077	Threonine dehydratase.	Homocysteine S-methyltransferase.	0.851
EFL37670.1	EFL39098.1	SSRG_00474	SSRG_01902	Threonine dehydratase.	Homoserine dehydrogenase.	0.644
EFL37670.1	EFL39476.1	SSRG_00474	SSRG_02280	Threonine dehydratase.	Threonine dehydratase.	0.876
EFL37670.1	EFL40417.1	SSRG_00474	SSRG_03221	Threonine dehydratase.	Cys/Met metabolism PLP-dependent enzyme.	0.905
EFL37670.1	EFL40981.1	SSRG_00474	SSRG_03785	Threonine dehydratase.	Cystathionine beta-synthase.	0.905
EFL37670.1	EFL41143.1	SSRG_00474	SSRG_03947	Threonine dehydratase.	Cysteine synthase.	0.698
EFL37670.1	EFL42248.1	SSRG_00474	SSRG_05052	Threonine dehydratase.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.919
EFL37670.1	EFL42595.1	SSRG_00474	SSRG_05399	Threonine dehydratase.	Methionine-gamma lyase.	0.621
EFL38273.1	EFL37670.1	SSRG_01077	SSRG_00474	Homocysteine S-methyltransferase.	Threonine dehydratase.	0.851
EFL38273.1	EFL38543.1	SSRG_01077	SSRG_01347	Homocysteine S-methyltransferase.	Cysteine synthase; Truncated CDS.	0.406
EFL38273.1	EFL39098.1	SSRG_01077	SSRG_01902	Homocysteine S-methyltransferase.	Homoserine dehydrogenase.	0.878
EFL38273.1	EFL39476.1	SSRG_01077	SSRG_02280	Homocysteine S-methyltransferase.	Threonine dehydratase.	0.851
EFL38273.1	EFL40417.1	SSRG_01077	SSRG_03221	Homocysteine S-methyltransferase.	Cys/Met metabolism PLP-dependent enzyme.	0.918
EFL38273.1	EFL40981.1	SSRG_01077	SSRG_03785	Homocysteine S-methyltransferase.	Cystathionine beta-synthase.	0.857
EFL38273.1	EFL41143.1	SSRG_01077	SSRG_03947	Homocysteine S-methyltransferase.	Cysteine synthase.	0.686
EFL38273.1	EFL42248.1	SSRG_01077	SSRG_05052	Homocysteine S-methyltransferase.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.917
EFL38273.1	EFL42595.1	SSRG_01077	SSRG_05399	Homocysteine S-methyltransferase.	Methionine-gamma lyase.	0.922
EFL38273.1	EFL42770.1	SSRG_01077	SSRG_05574	Homocysteine S-methyltransferase.	Pyridoxal-phosphate dependent enzyme.	0.880
EFL38543.1	EFL38273.1	SSRG_01347	SSRG_01077	Cysteine synthase; Truncated CDS.	Homocysteine S-methyltransferase.	0.406
EFL38543.1	EFL39098.1	SSRG_01347	SSRG_01902	Cysteine synthase; Truncated CDS.	Homoserine dehydrogenase.	0.564

page 1 of 5

Server load: low (32%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About