STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40420.1Cupin domain-containing protein. (105 aa)    
Predicted Functional Partners:
EFL38549.1
Glucosyltransferase.
  
 
 0.889
EFL41298.1
Transferase.
  
 
 0.889
EFL40417.1
Cys/Met metabolism PLP-dependent enzyme.
    
  0.831
EFL40418.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
  0.813
EFL40419.1
Membrane protein.
       0.783
EFL42524.1
Phosphoglucomutase/phosphomannomutase.
  
 
 0.750
EFL40421.1
Membrane protein.
       0.749
EFL40863.1
PTS system, fructose-specific family, IIABC component.
     
  0.734
EFL40415.1
NUDIX family hydrolase.
 
     0.704
EFL40182.1
Conserved hypothetical protein.
  
     0.695
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.