Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL40422.1IclR-family transcriptional regulator. (245 aa)    
Predicted Functional Partners:
EFL40423.1
Conserved hypothetical protein.
     
 0.789
EFL42048.1
IclR-family transcriptional regulator.
  
     0.744
EFL41432.1
IclR-family transcriptional regulator.
  
     0.720
EFL40421.1
Membrane protein.
       0.719
EFL39420.1
IclR family transcriptional regulator.
  
     0.691
EFL40415.1
NUDIX family hydrolase.
 
     0.681
EFL40420.1
Cupin domain-containing protein.
       0.663
EFL40417.1
Cys/Met metabolism PLP-dependent enzyme.
       0.641
EFL40418.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.641
EFL40419.1
Membrane protein.
       0.641
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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