Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL40426.1Bacterial stress protein. (447 aa)    
Predicted Functional Partners:
EFL41559.1
Conserved hypothetical protein.
    0.832
EFL41561.1
ATP/GTP-binding protein.
 
     0.787
EFL41563.1
Conserved hypothetical protein.
 
     0.781
EFL41562.1
Conserved hypothetical protein.
 
     0.780
EFL40260.1
Conserved hypothetical protein.
  
     0.774
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
       0.745
EFL37888.1
Conserved hypothetical protein.
  
     0.727
EFL41955.1
Tellurium resistance protein TerZ.
    
0.492
EFL41558.1
Integral membrane protein.
 
     0.412
EFL38431.1
Integral membrane protein.
 
     0.410
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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