STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40433.1ABC transporter, CydDC cysteine exporter. (520 aa)    
Predicted Functional Partners:
EFL40432.1
Cytochrome d ubiquinol oxidase, subunit II.
 
   
 0.988
EFL40431.1
Cytochrome D ubiquinol oxidase, subunit 1.
 
   
 0.984
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.821
EFL37334.1
ABC transporter, ATP-binding protein; Truncated CDS.
 
 
 
0.768
EFL43049.1
ABC transporter, transmembrane region; Truncated CDS; unextendable partial coding region.
 
 
 
0.767
EFL43050.1
Lantibiotic ABC transporter, permease/ATP-binding protein.
   
 
0.756
EFL38620.1
ABC transporter, permease/ATP-binding protein.
 
    
0.755
pat
Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
       0.725
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
  
 0.686
EFL37540.1
Condensation domain-containing protein.
  
 0.686
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.