STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40435.1M23 peptidase domain-containing protein. (353 aa)    
Predicted Functional Partners:
EFL39781.1
Peptidase M23B.
 
     0.742
EFL40075.1
Penicillin-binding protein.
  
     0.622
EFL39378.1
Bifunctional penicillin-binding protein 1a/1b pona1.
  
     0.618
EFL40399.1
Penicillin-binding protein.
  
     0.594
EFL41157.1
Penicillin-binding protein 1.
  
     0.583
EFL40431.1
Cytochrome D ubiquinol oxidase, subunit 1.
       0.552
EFL40432.1
Cytochrome d ubiquinol oxidase, subunit II.
       0.552
EFL40433.1
ABC transporter, CydDC cysteine exporter.
       0.552
EFL38717.1
GTP diphosphokinase.
  
     0.527
pat
Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
       0.522
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.