Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40445.1Integral membrane protein. (239 aa)    
Predicted Functional Partners:
EFL40442.1
ABC transporter ATP-binding protein.
 
  0.981
EFL40444.1
ABC transporter, ATP-binding protein.
 
  0.981
EFL40443.1
Integral membrane protein.
 
     0.969
EFL38785.1
Conserved hypothetical protein.
  
     0.633
EFL38867.1
Conserved hypothetical protein.
  
     0.556
EFL40437.1
Conserved hypothetical protein.
       0.552
EFL40438.1
Conserved hypothetical protein.
       0.552
kptA
RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.552
EFL40173.1
Conserved hypothetical protein.
  
     0.536
EFL39478.1
Sigma factor.
  
     0.520
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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