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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40450.1Copper resistance protein CopC. (632 aa)    
Predicted Functional Partners:
EFL40453.1
Nuclear export factor GLE1.
 
  
 0.997
EFL40451.1
Conserved hypothetical protein.
  
    0.980
EFL40449.1
Tat-translocated enzyme; Truncated CDS; unextendable partial coding region.
 
  
 0.960
EFL41482.1
Ferredoxin reductase.
    
   0.897
EFL41811.1
Ferredoxin reductase.
    
   0.897
EFL40448.1
Prephenate dehydratase.
     
 0.885
EFL40452.1
Electron transporter SCO1/SenC.
 
     0.885
EFL42982.1
Integral membrane protein.
  
    0.836
EFL41676.1
Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
  
 0.810
EFL42097.1
Membrane protein.
 
  
0.757
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.