STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40452.1Electron transporter SCO1/SenC. (218 aa)    
Predicted Functional Partners:
EFL40451.1
Conserved hypothetical protein.
 
   
 0.970
EFL41766.1
Cytochrome c oxidase, subunit II.
 
 0.931
EFL41998.1
Integral membrane transporter.
  
 0.918
EFL40450.1
Copper resistance protein CopC.
 
     0.890
EFL42094.1
Membrane protein.
 
 
 0.834
EFL40449.1
Tat-translocated enzyme; Truncated CDS; unextendable partial coding region.
       0.790
EFL40448.1
Prephenate dehydratase.
       0.783
EFL40453.1
Nuclear export factor GLE1.
       0.776
EFL39885.1
Thioredoxin family thiol:disulfide interchange protein.
 
 
 0.764
EFL40454.1
Integral membrane protein.
 
     0.728
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.