Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40454.1Integral membrane protein. (278 aa)    
Predicted Functional Partners:
EFL40786.1
Conserved hypothetical protein.
  
     0.750
EFL42194.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.745
EFL39469.1
Regulatory protein.
  
     0.739
EFL40125.1
Conserved hypothetical protein.
  
     0.738
EFL40452.1
Electron transporter SCO1/SenC.
 
     0.728
EFL40453.1
Nuclear export factor GLE1.
       0.725
EFL40473.1
Conserved hypothetical protein.
  
     0.711
EFL42624.1
Conserved hypothetical protein.
  
     0.681
EFL40451.1
Conserved hypothetical protein.
       0.679
EFL42307.1
Transcriptional regulator.
  
     0.679
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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