STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40488.1Integral membrane protein. (143 aa)    
Predicted Functional Partners:
EFL40487.1
Membrane protein.
 
     0.891
EFL38266.1
Integral membrane protein.
 
     0.773
EFL43476.1
Integral membrane protein.
 
     0.572
EFL41609.1
Conserved hypothetical protein.
  
     0.532
EFL40489.1
Conserved hypothetical protein.
       0.529
EFL42833.1
Membrane protein.
 
     0.480
EFL40880.1
Conserved hypothetical protein.
  
     0.473
EFL41702.1
Glyoxalase.
  
     0.466
EFL38013.1
Conserved hypothetical protein.
  
     0.463
EFL40490.1
Amidohydrolase.
       0.446
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.