STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40496.1Conserved hypothetical protein. (130 aa)    
Predicted Functional Partners:
EFL37442.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.991
EFL37443.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.991
EFL37620.1
Integral membrane sensor protein.
  
 0.967
EFL42638.1
Integral membrane sensor protein.
  
 0.967
EFL43034.1
Membrane protein.
  
 0.967
EFL38761.1
Regulatory protein.
  
 0.954
EFL38029.1
Integral membrane sensor protein.
  
 0.947
EFL38467.1
Conserved hypothetical protein.
  
 0.947
EFL39131.1
Conserved hypothetical protein.
  
 0.947
EFL41093.1
Conserved hypothetical protein.
  
 0.947
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.