STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40497.1ANTAR domain-containing protein. (240 aa)    
Predicted Functional Partners:
EFL37307.1
Amino acid binding protein.
  
   0.809
EFL40786.1
Conserved hypothetical protein.
  
   0.809
EFL41912.1
Branched chain amino acid binding protein.
  
   0.809
EFL43120.1
Conserved hypothetical protein.
  
   0.809
EFL37915.1
Conserved hypothetical protein.
  
   0.796
EFL40495.1
PPOX class F420-dependent enzyme.
 
     0.772
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 
 0.661
EFL40496.1
Conserved hypothetical protein.
       0.628
EFL39938.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
 
 0.616
EFL39266.1
Conserved hypothetical protein.
  
     0.580
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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