STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40509.1Membrane protein. (203 aa)    
Predicted Functional Partners:
EFL40510.1
Conserved hypothetical protein.
       0.763
EFL42232.1
Conserved hypothetical protein.
  
     0.691
EFL41595.1
Integral membrane protein.
  
     0.687
EFL42721.1
Integral membrane protein.
  
     0.674
EFL42442.1
Secreted protein.
  
     0.672
EFL39945.1
Conserved hypothetical protein.
  
     0.657
EFL41403.1
Membrane protein.
  
     0.625
EFL40582.1
Membrane protein; Overlaps another CDS with the same product name.
  
     0.615
EFL42163.1
Integral membrane protein.
  
     0.607
EFL41864.1
Membrane protein.
  
     0.603
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.