STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40513.1Penicillin amidase. (116 aa)    
Predicted Functional Partners:
EFL40514.1
Acetyltransferase.
     0.988
EFL40515.1
Cupin superfamily protein.
       0.878
EFL40516.1
Dehydrogenase/reductase 3.
       0.878
EFL41231.1
Acetyltransferase.
     0.878
EFL40872.1
Penicillin amidase.
  
  
  0.868
EFL40271.1
Beta-lactamase.
     
  0.850
EFL43350.1
Beta lactamase.
     
  0.850
EFL41230.1
Siderophore synthetase component.
 
     0.774
EFL41232.1
Alcaligin biosynthesis enzyme.
 
  
 0.769
EFL41233.1
L-2,4-diaminobutyrate decarboxylase (DABA decarboxylase)(DABA-DC).
 
   
 0.754
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.