STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40540.1Two-component system sensor kinase. (419 aa)    
Predicted Functional Partners:
EFL40539.1
DNA-binding response regulator.
 
 0.994
EFL40242.1
Two-component system response regulator TcsR2.
 
 0.949
EFL41600.1
Two-component system response regulator TcsR2.
 
 0.948
EFL40541.1
Integral membrane protein.
 
  
 0.914
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.906
EFL40542.1
ABC transporter, ATP-binding subunit.
 
  
 0.877
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.871
EFL38527.1
Two-component sensor histidine kinase; Truncated CDS.
  
  
 
0.776
EFL39995.1
Two-component system response regulator.
  
  0.773
EFL42602.1
Response regulator, two-component system.
  
  0.765
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.