Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EFL40540.1Two-component system sensor kinase. (419 aa)    
Predicted Functional Partners:
EFL40539.1
DNA-binding response regulator.
 
 0.991
EFL40242.1
Two-component system response regulator TcsR2.
 
 0.943
EFL41600.1
Two-component system response regulator TcsR2.
 
 0.942
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.887
EFL40541.1
Integral membrane protein.
 
  
 0.874
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.858
EFL40542.1
ABC transporter, ATP-binding subunit.
 
   
 0.821
EFL38527.1
Two-component sensor histidine kinase; Truncated CDS.
  
  
 
0.754
EFL42695.1
Hypothetical protein.
  
 0.733
EFL39995.1
Two-component system response regulator.
  
  0.730
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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