STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40541.1Integral membrane protein. (258 aa)    
Predicted Functional Partners:
EFL40542.1
ABC transporter, ATP-binding subunit.
 
 
 0.986
EFL40540.1
Two-component system sensor kinase.
 
  
 0.914
EFL40539.1
DNA-binding response regulator.
 
   
 0.910
EFL41601.1
Two-component system sensor kinase.
  
  
 0.572
EFL39057.1
ABC transporter transmembrane protein.
 
 
 0.485
EFL40316.1
Daunorubicin resistance transmembrane protein.
    
  0.480
EFL41060.1
ABC transporter membrane component.
    
  0.480
EFL41999.1
ABC-type efflux system, permease.
  
  
  0.469
EFL39059.1
ABC transporter integral membrane subunit.
 
 
 0.467
EFL40898.1
Cobalt ABC transporter, permease CbiQ.
  
  
  0.439
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.