STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40553.1Conserved hypothetical protein. (280 aa)    
Predicted Functional Partners:
EFL40552.1
Valine dehydrogenase (ValDH); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.758
EFL40784.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.687
EFL40551.1
Conserved hypothetical protein.
       0.676
EFL41673.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.670
EFL40821.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.609
EFL40457.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.595
EFL41595.1
Integral membrane protein.
  
     0.570
EFL41736.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
     0.550
EFL40019.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.542
EFL41941.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.541
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.