STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40568.1Conserved hypothetical protein. (370 aa)    
Predicted Functional Partners:
EFL41895.1
Glutamate synthase large subunit.
  
 
 0.861
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.846
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.846
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.839
EFL41200.1
Decarboxylase; Truncated CDS; overlaps another CDS with the same product name.
     
 0.835
EFL41201.1
Decarboxylase; Overlaps another CDS with the same product name.
     
 0.832
EFL40837.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
 0.814
EFL38171.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.789
EFL40169.1
Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
  
 
 0.789
EFL39989.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
     
 0.706
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.