STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40572.1Integral membrane protein. (424 aa)    
Predicted Functional Partners:
EFL40573.1
MarR-family transcriptional regulator.
     
 0.920
EFL42248.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.475
EFL43051.1
Membrane protein.
 
 
 0.465
EFL42163.1
Integral membrane protein.
  
     0.436
EFL40582.1
Membrane protein; Overlaps another CDS with the same product name.
  
     0.434
EFL42442.1
Secreted protein.
  
     0.429
EFL39945.1
Conserved hypothetical protein.
  
     0.428
EFL40182.1
Conserved hypothetical protein.
  
     0.418
EFL40537.1
Conserved hypothetical protein.
  
     0.414
EFL41134.1
Immune inhibitor A.
  
     0.408
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.