STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40577.1Two-component sensor kinase. (423 aa)    
Predicted Functional Partners:
EFL40576.1
Two-component system response regulator.
  0.978
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.906
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.871
EFL39995.1
Two-component system response regulator.
 
  0.846
EFL40578.1
Integral membrane protein.
 
    0.840
EFL42251.1
Two-component system response regulator.
 
  0.840
EFL41455.1
Two-component system response regulator.
 
  0.838
EFL40194.1
Two-component system response regulator.
 
  0.837
EFL40242.1
Two-component system response regulator TcsR2.
  
  0.836
EFL38175.1
Two-component system response regulator.
 
  0.835
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.