STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40578.1Integral membrane protein. (255 aa)    
Predicted Functional Partners:
EFL40579.1
ABC transporter, ATP-binding protein.
 
     0.932
EFL40577.1
Two-component sensor kinase.
 
     0.839
EFL40576.1
Two-component system response regulator.
       0.816
EFL39056.1
ABC transporter, ATP-binding protein.
 
     0.697
EFL39058.1
ABC transporter, ATP-binding protein.
 
     0.685
EFL40189.1
ABC transporter membrane-spanning protein.
  
 
 0.617
EFL40190.1
ABC transporter membrane-spanning protein; Truncated CDS.
  
 
 0.617
EFL38384.1
Conserved hypothetical protein.
  
  0.582
EFL40580.1
Acetyltransferase.
       0.575
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.551
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.