STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40581.1Membrane protein; Overlaps another CDS with the same product name. (174 aa)    
Predicted Functional Partners:
EFL40583.1
ATP/GTP-binding protein.
 
  
 0.950
EFL40585.1
Integral membrane protein.
 
     0.928
EFL40584.1
Membrane protein.
 
     0.900
EFL40582.1
Membrane protein; Overlaps another CDS with the same product name.
     0.882
EFL40149.1
TraG-family protein.
  
     0.764
EFL40586.1
Integral membrane protein.
       0.730
EFL40148.1
ATP/GTP-binding protein.
 
  
 0.714
EFL40147.1
Integral membrane protein.
 
   
 0.660
EFL41151.1
HNH endonuclease domain-containing protein; Overlaps another CDS with the same product name.
 
 
 
 0.601
EFL40480.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.577
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.