Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40585.1Integral membrane protein. (436 aa)    
Predicted Functional Partners:
EFL40584.1
Membrane protein.
 
     0.968
EFL40583.1
ATP/GTP-binding protein.
 
     0.966
EFL40581.1
Membrane protein; Overlaps another CDS with the same product name.
 
     0.928
EFL40582.1
Membrane protein; Overlaps another CDS with the same product name.
 
     0.924
EFL40586.1
Integral membrane protein.
       0.862
EFL42502.1
Membrane protein.
  
 
   0.832
EFL40949.1
Cellulose-binding protein.
  
 
   0.785
EFL39336.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
   
 0.771
EFL40710.1
Serine metalloprotease MprA.
   
 0.771
EFL41544.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
   
 0.771
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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