Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40592.1Conserved hypothetical protein. (137 aa)    
Predicted Functional Partners:
EFL40593.1
Pit accessory protein.
     
 0.817
EFL40594.1
Phosphate transporter.
       0.742
EFL37930.1
Secreted protein.
  
  
 0.628
EFL37338.1
Mycothiol-dependent formaldehyde dehydrogenase.
  
    0.554
EFL42205.1
Alcohol dehydrogenase (zinc-binding).
  
    0.554
EFL43062.1
Mycothiol-dependent formaldehyde dehydrogenase.
  
    0.554
EFL43254.1
Alcohol dehydrogenase; Truncated CDS; unextendable partial coding region.
  
    0.554
EFL43336.1
Benzyl-alcohol dehydrogenase.
  
    0.554
EFL43341.1
Aryl-alcohol dehydrogenase.
  
    0.554
EFL41285.1
Heavy metal-associated domain-containing protein.
 
  
 0.497
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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